Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Scn1bP97952 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.03□□□□□ -0.48
Scn1bP97952 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Gm8000-201ENSMUST00000188378 592 ntBASIC12.03□□□□□ -0.48
Scn1bP97952 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.03□□□□□ -0.48
Scn1bP97952 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.03□□□□□ -0.48
Scn1bP97952 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.03□□□□□ -0.48
Scn1bP97952 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Scn1bP97952 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.03□□□□□ -0.48
Scn1bP97952 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Scn1bP97952 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Scn1bP97952 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Scn1bP97952 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Scn1bP97952 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn1bP97952 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.02□□□□□ -0.48
Scn1bP97952 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn1bP97952 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn1bP97952 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn1bP97952 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn1bP97952 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Scn1bP97952 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn1bP97952 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn1bP97952 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn1bP97952 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn1bP97952 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn1bP97952 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Scn1bP97952 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Scn1bP97952 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.02□□□□□ -0.49
Scn1bP97952 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.02□□□□□ -0.49
Scn1bP97952 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.02□□□□□ -0.49
Scn1bP97952 Gm38225-201ENSMUST00000194001 393 ntBASIC12.02□□□□□ -0.49
Scn1bP97952 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.02□□□□□ -0.49
Scn1bP97952 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.02□□□□□ -0.49
Scn1bP97952 AW822252-206ENSMUST00000208904 237 ntBASIC12.02□□□□□ -0.49
Scn1bP97952 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Scn1bP97952 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Scn1bP97952 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.02□□□□□ -0.49
Scn1bP97952 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.02□□□□□ -0.49
Scn1bP97952 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.02□□□□□ -0.49
Scn1bP97952 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn1bP97952 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Scn1bP97952 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.01□□□□□ -0.49
Scn1bP97952 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Scn1bP97952 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.01□□□□□ -0.49
Scn1bP97952 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.01□□□□□ -0.49
Scn1bP97952 Gm27525-201ENSMUST00000184465 107 ntBASIC12.01□□□□□ -0.49
Scn1bP97952 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.01□□□□□ -0.49
Scn1bP97952 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms