Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.43□□□□□ -0.26
Thumpd3P97770 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Thumpd3P97770 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Thumpd3P97770 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd3P97770 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd3P97770 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd3P97770 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd3P97770 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd3P97770 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.42□□□□□ -0.26
Thumpd3P97770 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.42□□□□□ -0.26
Thumpd3P97770 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Thumpd3P97770 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Thumpd3P97770 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.42□□□□□ -0.26
Thumpd3P97770 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Gm12585-201ENSMUST00000117307 290 ntBASIC13.42□□□□□ -0.26
Thumpd3P97770 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Thumpd3P97770 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Thumpd3P97770 Gm10766-202ENSMUST00000194123 606 ntBASIC13.42□□□□□ -0.26
Thumpd3P97770 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.42□□□□□ -0.26
Thumpd3P97770 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.42□□□□□ -0.26
Thumpd3P97770 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Thumpd3P97770 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Thumpd3P97770 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd3P97770 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Thumpd3P97770 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Thumpd3P97770 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Thumpd3P97770 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.41□□□□□ -0.26
Thumpd3P97770 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Thumpd3P97770 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Thumpd3P97770 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.41□□□□□ -0.26
Thumpd3P97770 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.41□□□□□ -0.26
Thumpd3P97770 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Thumpd3P97770 Gm37917-201ENSMUST00000194711 392 ntBASIC13.41□□□□□ -0.26
Thumpd3P97770 Gm18018-201ENSMUST00000198273 408 ntBASIC13.41□□□□□ -0.26
Thumpd3P97770 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.41□□□□□ -0.26
Thumpd3P97770 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Gm6180-201ENSMUST00000065243 498 ntBASIC13.41□□□□□ -0.26
Thumpd3P97770 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Thumpd3P97770 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.41□□□□□ -0.26
Thumpd3P97770 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Thumpd3P97770 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Thumpd3P97770 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd3P97770 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd3P97770 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms