Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.43■□□□□ 0.22
Smarcc1P97496 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.43■□□□□ 0.22
Smarcc1P97496 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc1P97496 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.43■□□□□ 0.22
Smarcc1P97496 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.43■□□□□ 0.22
Smarcc1P97496 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc1P97496 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc1P97496 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.43■□□□□ 0.22
Smarcc1P97496 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.43■□□□□ 0.22
Smarcc1P97496 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc1P97496 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Smarcc1P97496 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc1P97496 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc1P97496 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc1P97496 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc1P97496 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc1P97496 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc1P97496 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smarcc1P97496 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smarcc1P97496 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smarcc1P97496 Gm14109-201ENSMUST00000118814 309 ntBASIC16.42■□□□□ 0.22
Smarcc1P97496 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smarcc1P97496 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Gm26361-201ENSMUST00000158868 186 ntBASIC16.42■□□□□ 0.22
Smarcc1P97496 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.42■□□□□ 0.22
Smarcc1P97496 Gm44262-201ENSMUST00000204969 372 ntBASIC16.42■□□□□ 0.22
Smarcc1P97496 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcc1P97496 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smarcc1P97496 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smarcc1P97496 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smarcc1P97496 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcc1P97496 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc1P97496 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Smarcc1P97496 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.41■□□□□ 0.22
Smarcc1P97496 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.41■□□□□ 0.22
Smarcc1P97496 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Smarcc1P97496 Gm14704-201ENSMUST00000120300 874 ntBASIC16.41■□□□□ 0.22
Smarcc1P97496 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.41■□□□□ 0.22
Smarcc1P97496 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Smarcc1P97496 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smarcc1P97496 Gm25732-201ENSMUST00000175168 60 ntBASIC16.41■□□□□ 0.22
Smarcc1P97496 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC16.41■□□□□ 0.22
Smarcc1P97496 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.41■□□□□ 0.22
Smarcc1P97496 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.41■□□□□ 0.22
Smarcc1P97496 Gm28450-201ENSMUST00000187349 638 ntBASIC16.41■□□□□ 0.22
Smarcc1P97496 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.41■□□□□ 0.22
Smarcc1P97496 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.41■□□□□ 0.22
Smarcc1P97496 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.41■□□□□ 0.22
Smarcc1P97496 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.41■□□□□ 0.22
Smarcc1P97496 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.41■□□□□ 0.22
Smarcc1P97496 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smarcc1P97496 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc1P97496 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcc1P97496 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcc1P97496 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Smarcc1P97496 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Smarcc1P97496 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc1P97496 Gm13461-201ENSMUST00000120980 662 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms