Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.42□□□□□ -0.1
Lig3P97386 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.42□□□□□ -0.1
Lig3P97386 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.42□□□□□ -0.1
Lig3P97386 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.42□□□□□ -0.1
Lig3P97386 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.42□□□□□ -0.1
Lig3P97386 Gm18041-201ENSMUST00000218210 618 ntBASIC14.42□□□□□ -0.1
Lig3P97386 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lig3P97386 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lig3P97386 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lig3P97386 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.42□□□□□ -0.1
Lig3P97386 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.42□□□□□ -0.1
Lig3P97386 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Lig3P97386 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Lig3P97386 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lig3P97386 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lig3P97386 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.41□□□□□ -0.1
Lig3P97386 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.41□□□□□ -0.1
Lig3P97386 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.41□□□□□ -0.1
Lig3P97386 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.41□□□□□ -0.1
Lig3P97386 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.41□□□□□ -0.1
Lig3P97386 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Gm7584-201ENSMUST00000175829 940 ntBASIC14.41□□□□□ -0.1
Lig3P97386 Gm38266-201ENSMUST00000194931 421 ntBASIC14.41□□□□□ -0.1
Lig3P97386 Gm43094-201ENSMUST00000196549 921 ntBASIC14.41□□□□□ -0.1
Lig3P97386 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.41□□□□□ -0.1
Lig3P97386 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.41□□□□□ -0.1
Lig3P97386 Gm38671-201ENSMUST00000200573 130 ntBASIC14.41□□□□□ -0.1
Lig3P97386 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.41□□□□□ -0.1
Lig3P97386 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lig3P97386 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.41□□□□□ -0.1
Lig3P97386 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lig3P97386 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.41□□□□□ -0.1
Lig3P97386 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lig3P97386 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lig3P97386 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lig3P97386 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lig3P97386 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lig3P97386 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lig3P97386 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.4□□□□□ -0.1
Lig3P97386 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.4□□□□□ -0.1
Lig3P97386 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Mir8109-201ENSMUST00000184375 117 ntBASIC14.4□□□□□ -0.1
Lig3P97386 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.4□□□□□ -0.1
Lig3P97386 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.4□□□□□ -0.1
Lig3P97386 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.4□□□□□ -0.1
Lig3P97386 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Lig3P97386 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lig3P97386 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms