Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.74□□□□□ -0.53
H3f3aP84244 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.74□□□□□ -0.53
H3f3aP84244 Gm11978-201ENSMUST00000122315 466 ntBASIC11.74□□□□□ -0.53
H3f3aP84244 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.74□□□□□ -0.53
H3f3aP84244 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.74□□□□□ -0.53
H3f3aP84244 Gm8652-201ENSMUST00000181363 964 ntBASIC11.74□□□□□ -0.53
H3f3aP84244 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.74□□□□□ -0.53
H3f3aP84244 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.74□□□□□ -0.53
H3f3aP84244 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.74□□□□□ -0.53
H3f3aP84244 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.74□□□□□ -0.53
H3f3aP84244 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Gm16372-201ENSMUST00000073088 450 ntBASIC11.74□□□□□ -0.53
H3f3aP84244 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.74□□□□□ -0.53
H3f3aP84244 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
H3f3aP84244 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
H3f3aP84244 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.74□□□□□ -0.53
H3f3aP84244 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.74□□□□□ -0.53
H3f3aP84244 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.73□□□□□ -0.53
H3f3aP84244 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
H3f3aP84244 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
H3f3aP84244 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.73□□□□□ -0.53
H3f3aP84244 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H3f3aP84244 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
H3f3aP84244 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.73□□□□□ -0.53
H3f3aP84244 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
H3f3aP84244 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.73□□□□□ -0.53
H3f3aP84244 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.73□□□□□ -0.53
H3f3aP84244 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.73□□□□□ -0.53
H3f3aP84244 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.73□□□□□ -0.53
H3f3aP84244 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.73□□□□□ -0.53
H3f3aP84244 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.73□□□□□ -0.53
H3f3aP84244 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
H3f3aP84244 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
H3f3aP84244 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
H3f3aP84244 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3aP84244 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H3f3aP84244 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
H3f3aP84244 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.73□□□□□ -0.53
H3f3aP84244 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.73□□□□□ -0.53
H3f3aP84244 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
H3f3aP84244 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
H3f3aP84244 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.72□□□□□ -0.53
H3f3aP84244 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.72□□□□□ -0.53
H3f3aP84244 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3aP84244 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms