Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.76□□□□□ -0.53
SgcbP82349 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.76□□□□□ -0.53
SgcbP82349 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Gm16202-201ENSMUST00000117532 544 ntBASIC11.76□□□□□ -0.53
SgcbP82349 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.76□□□□□ -0.53
SgcbP82349 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Gm29649-201ENSMUST00000185649 419 ntBASIC11.76□□□□□ -0.53
SgcbP82349 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.76□□□□□ -0.53
SgcbP82349 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.76□□□□□ -0.53
SgcbP82349 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.76□□□□□ -0.53
SgcbP82349 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.76□□□□□ -0.53
SgcbP82349 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.76□□□□□ -0.53
SgcbP82349 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SgcbP82349 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.76□□□□□ -0.53
SgcbP82349 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SgcbP82349 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcbP82349 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.75□□□□□ -0.53
SgcbP82349 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.75□□□□□ -0.53
SgcbP82349 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Gm6447-201ENSMUST00000118905 835 ntBASIC11.75□□□□□ -0.53
SgcbP82349 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SgcbP82349 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.75□□□□□ -0.53
SgcbP82349 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.75□□□□□ -0.53
SgcbP82349 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.75□□□□□ -0.53
SgcbP82349 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.75□□□□□ -0.53
SgcbP82349 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcbP82349 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.75□□□□□ -0.53
SgcbP82349 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SgcbP82349 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SgcbP82349 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms