Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Stra8P70278 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Gm15770-201ENSMUST00000117498 584 ntBASIC18.21■□□□□ 0.51
Stra8P70278 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.21■□□□□ 0.51
Stra8P70278 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.21■□□□□ 0.51
Stra8P70278 Gm8927-201ENSMUST00000181978 981 ntBASIC18.21■□□□□ 0.51
Stra8P70278 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.21■□□□□ 0.51
Stra8P70278 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Gm20445-201ENSMUST00000061905 565 ntBASIC18.21■□□□□ 0.51
Stra8P70278 Gm3222-201ENSMUST00000071282 990 ntBASIC18.21■□□□□ 0.51
Stra8P70278 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Gm3695-201ENSMUST00000087222 1009 ntBASIC18.21■□□□□ 0.51
Stra8P70278 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Stra8P70278 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Stra8P70278 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Stra8P70278 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC18.2■□□□□ 0.5
Stra8P70278 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Stra8P70278 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Stra8P70278 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Stra8P70278 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Stra8P70278 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Stra8P70278 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Stra8P70278 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Stra8P70278 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra8P70278 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Stra8P70278 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Stra8P70278 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC18.19■□□□□ 0.5
Stra8P70278 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Stra8P70278 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.19■□□□□ 0.5
Stra8P70278 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.19■□□□□ 0.5
Stra8P70278 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
Stra8P70278 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Stra8P70278 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Stra8P70278 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Stra8P70278 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Stra8P70278 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.18■□□□□ 0.5
Stra8P70278 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.18■□□□□ 0.5
Stra8P70278 Gm16215-201ENSMUST00000161990 637 ntBASIC18.18■□□□□ 0.5
Stra8P70278 Mir7221-201ENSMUST00000184009 72 ntBASIC18.18■□□□□ 0.5
Stra8P70278 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.18■□□□□ 0.5
Stra8P70278 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Gm5425-201ENSMUST00000214125 459 ntBASIC18.18■□□□□ 0.5
Stra8P70278 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Stra8P70278 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms