Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11□□□□□ -0.65
Pdlim4P70271 Gm6983-201ENSMUST00000214912 628 ntBASIC11□□□□□ -0.65
Pdlim4P70271 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11□□□□□ -0.65
Pdlim4P70271 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11□□□□□ -0.65
Pdlim4P70271 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pdlim4P70271 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pdlim4P70271 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Pdlim4P70271 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Pdlim4P70271 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Pdlim4P70271 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pdlim4P70271 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.99□□□□□ -0.65
Pdlim4P70271 Gm44397-201ENSMUST00000195950 113 ntBASIC10.99□□□□□ -0.65
Pdlim4P70271 Gm45384-201ENSMUST00000210451 277 ntBASIC10.99□□□□□ -0.65
Pdlim4P70271 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.99□□□□□ -0.65
Pdlim4P70271 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.99□□□□□ -0.65
Pdlim4P70271 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.99□□□□□ -0.65
Pdlim4P70271 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.99□□□□□ -0.65
Pdlim4P70271 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.99□□□□□ -0.65
Pdlim4P70271 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Grk6-205ENSMUST00000224653 2976 ntBASIC10.99□□□□□ -0.65
Pdlim4P70271 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pdlim4P70271 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Pdlim4P70271 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pdlim4P70271 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.98□□□□□ -0.65
Pdlim4P70271 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Gm11424-201ENSMUST00000121929 829 ntBASIC10.98□□□□□ -0.65
Pdlim4P70271 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Pdlim4P70271 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.98□□□□□ -0.65
Pdlim4P70271 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.98□□□□□ -0.65
Pdlim4P70271 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.98□□□□□ -0.65
Pdlim4P70271 Gm29608-201ENSMUST00000190444 463 ntBASIC10.98□□□□□ -0.65
Pdlim4P70271 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.98□□□□□ -0.65
Pdlim4P70271 Gm7653-201ENSMUST00000214567 508 ntBASIC10.98□□□□□ -0.65
Pdlim4P70271 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.98□□□□□ -0.65
Pdlim4P70271 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pdlim4P70271 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pdlim4P70271 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.98□□□□□ -0.65
Pdlim4P70271 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.98□□□□□ -0.65
Pdlim4P70271 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms