Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sec61a1P61620 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sec61a1P61620 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Gm22189-201ENSMUST00000103822 86 ntBASIC11.62□□□□□ -0.55
Sec61a1P61620 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.62□□□□□ -0.55
Sec61a1P61620 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.62□□□□□ -0.55
Sec61a1P61620 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.62□□□□□ -0.55
Sec61a1P61620 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.62□□□□□ -0.55
Sec61a1P61620 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.62□□□□□ -0.55
Sec61a1P61620 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.62□□□□□ -0.55
Sec61a1P61620 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sec61a1P61620 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61a1P61620 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.61□□□□□ -0.55
Sec61a1P61620 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Gm12859-201ENSMUST00000117834 427 ntBASIC11.61□□□□□ -0.55
Sec61a1P61620 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sec61a1P61620 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.61□□□□□ -0.55
Sec61a1P61620 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sec61a1P61620 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sec61a1P61620 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sec61a1P61620 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.61□□□□□ -0.55
Sec61a1P61620 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sec61a1P61620 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.61□□□□□ -0.55
Sec61a1P61620 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.61□□□□□ -0.55
Sec61a1P61620 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Sec61a1P61620 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sec61a1P61620 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a1P61620 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sec61a1P61620 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms