Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.42□□□□□ -0.9
Cks1bP61025 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC9.42□□□□□ -0.9
Cks1bP61025 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.42□□□□□ -0.9
Cks1bP61025 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cks1bP61025 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cks1bP61025 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cks1bP61025 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC9.42□□□□□ -0.9
Cks1bP61025 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Gm6756-201ENSMUST00000180647 1620 ntBASIC9.42□□□□□ -0.9
Cks1bP61025 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1bP61025 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cks1bP61025 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.41□□□□□ -0.9
Cks1bP61025 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.41□□□□□ -0.9
Cks1bP61025 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.41□□□□□ -0.9
Cks1bP61025 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC9.41□□□□□ -0.9
Cks1bP61025 AC126549.2-201ENSMUST00000223997 1976 ntBASIC9.41□□□□□ -0.9
Cks1bP61025 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cks1bP61025 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Cks1bP61025 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.41□□□□□ -0.9
Cks1bP61025 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cks1bP61025 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9.41□□□□□ -0.9
Cks1bP61025 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Cks1bP61025 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Cks1bP61025 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Cks1bP61025 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC9.41□□□□□ -0.9
Cks1bP61025 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC9.41□□□□□ -0.9
Cks1bP61025 Gm5177-201ENSMUST00000183092 997 ntBASIC9.41□□□□□ -0.9
Cks1bP61025 Gm43332-201ENSMUST00000202511 1044 ntBASIC9.41□□□□□ -0.9
Cks1bP61025 Klk2-ps-201ENSMUST00000205342 571 ntBASIC9.41□□□□□ -0.9
Cks1bP61025 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cks1bP61025 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.41□□□□□ -0.9
Cks1bP61025 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Cks1bP61025 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cks1bP61025 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cks1bP61025 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Cks1bP61025 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1bP61025 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.4□□□□□ -0.9
Cks1bP61025 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Cks1bP61025 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Cks1bP61025 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks1bP61025 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms