Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Lbx1P52955 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lbx1P52955 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.74□□□□□ -0.37
Lbx1P52955 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lbx1P52955 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.73□□□□□ -0.37
Lbx1P52955 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.73□□□□□ -0.37
Lbx1P52955 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lbx1P52955 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Lbx1P52955 Mir1901-201ENSMUST00000122616 78 ntBASIC12.73□□□□□ -0.37
Lbx1P52955 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Mir6998-201ENSMUST00000183343 64 ntBASIC12.73□□□□□ -0.37
Lbx1P52955 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Gm17812-201ENSMUST00000204935 318 ntBASIC12.73□□□□□ -0.37
Lbx1P52955 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Lbx1P52955 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.73□□□□□ -0.37
Lbx1P52955 Gm9139-201ENSMUST00000218817 700 ntBASIC12.73□□□□□ -0.37
Lbx1P52955 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.73□□□□□ -0.37
Lbx1P52955 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.73□□□□□ -0.37
Lbx1P52955 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Gm25201-201ENSMUST00000083093 170 ntBASIC12.73□□□□□ -0.37
Lbx1P52955 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lbx1P52955 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lbx1P52955 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Lbx1P52955 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.73□□□□□ -0.37
Lbx1P52955 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lbx1P52955 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lbx1P52955 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lbx1P52955 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.72□□□□□ -0.37
Lbx1P52955 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lbx1P52955 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.72□□□□□ -0.37
Lbx1P52955 Gm12403-201ENSMUST00000121384 959 ntBASIC12.72□□□□□ -0.37
Lbx1P52955 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.72□□□□□ -0.37
Lbx1P52955 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.72□□□□□ -0.37
Lbx1P52955 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.72□□□□□ -0.37
Lbx1P52955 Gzmn-202ENSMUST00000225535 989 ntBASIC12.72□□□□□ -0.37
Lbx1P52955 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Lbx1P52955 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.72□□□□□ -0.37
Lbx1P52955 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lbx1P52955 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.71□□□□□ -0.37
Lbx1P52955 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.71□□□□□ -0.37
Lbx1P52955 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.71□□□□□ -0.37
Lbx1P52955 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lbx1P52955 Mir6546-201ENSMUST00000184460 62 ntBASIC12.71□□□□□ -0.37
Lbx1P52955 Gm9463-201ENSMUST00000206707 601 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms