Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Gm11803-201ENSMUST00000119966 444 ntBASIC13.03□□□□□ -0.32
Pdx1P52946 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.03□□□□□ -0.32
Pdx1P52946 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdx1P52946 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Gm5745-201ENSMUST00000183748 313 ntBASIC13.03□□□□□ -0.32
Pdx1P52946 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.03□□□□□ -0.32
Pdx1P52946 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.03□□□□□ -0.32
Pdx1P52946 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.03□□□□□ -0.32
Pdx1P52946 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.03□□□□□ -0.32
Pdx1P52946 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.03□□□□□ -0.32
Pdx1P52946 Gm44069-201ENSMUST00000204898 506 ntBASIC13.03□□□□□ -0.32
Pdx1P52946 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdx1P52946 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pdx1P52946 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdx1P52946 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdx1P52946 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pdx1P52946 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pdx1P52946 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdx1P52946 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.02□□□□□ -0.32
Pdx1P52946 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pdx1P52946 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Pdx1P52946 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdx1P52946 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdx1P52946 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdx1P52946 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdx1P52946 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdx1P52946 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.02□□□□□ -0.32
Pdx1P52946 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.02□□□□□ -0.33
Pdx1P52946 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Pdx1P52946 Gm16202-201ENSMUST00000117532 544 ntBASIC13.02□□□□□ -0.33
Pdx1P52946 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.02□□□□□ -0.33
Pdx1P52946 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Gm8810-201ENSMUST00000172895 754 ntBASIC13.02□□□□□ -0.33
Pdx1P52946 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.02□□□□□ -0.33
Pdx1P52946 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Gm17794-201ENSMUST00000220252 955 ntBASIC13.02□□□□□ -0.33
Pdx1P52946 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Gm10012-201ENSMUST00000078252 192 ntBASIC13.02□□□□□ -0.33
Pdx1P52946 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.02□□□□□ -0.33
Pdx1P52946 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pdx1P52946 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.02□□□□□ -0.33
Pdx1P52946 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.02□□□□□ -0.33
Pdx1P52946 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pdx1P52946 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdx1P52946 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pdx1P52946 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pdx1P52946 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Pdx1P52946 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pdx1P52946 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pdx1P52946 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pdx1P52946 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pdx1P52946 Gm11978-201ENSMUST00000122315 466 ntBASIC13.01□□□□□ -0.33
Pdx1P52946 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pdx1P52946 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.01□□□□□ -0.33
Pdx1P52946 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.01□□□□□ -0.33
Pdx1P52946 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms