Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.34□□□□□ -0.43
Sox2P48432 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Gm12585-201ENSMUST00000117307 290 ntBASIC12.34□□□□□ -0.43
Sox2P48432 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.34□□□□□ -0.43
Sox2P48432 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.34□□□□□ -0.43
Sox2P48432 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox2P48432 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sox2P48432 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox2P48432 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox2P48432 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox2P48432 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Sox2P48432 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.34□□□□□ -0.43
Sox2P48432 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox2P48432 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox2P48432 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox2P48432 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox2P48432 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox2P48432 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox2P48432 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Gm15240-201ENSMUST00000118156 720 ntBASIC12.33□□□□□ -0.44
Sox2P48432 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Sox2P48432 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox2P48432 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox2P48432 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox2P48432 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox2P48432 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.33□□□□□ -0.44
Sox2P48432 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox2P48432 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox2P48432 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.32□□□□□ -0.44
Sox2P48432 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox2P48432 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox2P48432 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Sox2P48432 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Sox2P48432 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox2P48432 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox2P48432 Mir449b-201ENSMUST00000104833 80 ntBASIC12.32□□□□□ -0.44
Sox2P48432 Gm15693-201ENSMUST00000120470 637 ntBASIC12.32□□□□□ -0.44
Sox2P48432 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.32□□□□□ -0.44
Sox2P48432 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.32□□□□□ -0.44
Sox2P48432 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.32□□□□□ -0.44
Sox2P48432 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.32□□□□□ -0.44
Sox2P48432 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox2P48432 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Sox2P48432 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox2P48432 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms