Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.59□□□□□ -0.23
Msh2P43247 Gm18905-201ENSMUST00000205454 928 ntBASIC13.59□□□□□ -0.23
Msh2P43247 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Msh2P43247 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.59□□□□□ -0.23
Msh2P43247 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Msh2P43247 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Msh2P43247 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Msh2P43247 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.58□□□□□ -0.23
Msh2P43247 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Msh2P43247 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.58□□□□□ -0.24
Msh2P43247 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.58□□□□□ -0.24
Msh2P43247 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.58□□□□□ -0.24
Msh2P43247 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.58□□□□□ -0.24
Msh2P43247 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.58□□□□□ -0.24
Msh2P43247 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.58□□□□□ -0.24
Msh2P43247 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.58□□□□□ -0.24
Msh2P43247 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.58□□□□□ -0.24
Msh2P43247 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Msh2P43247 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Rubie-203ENSMUST00000227803 2430 ntBASIC13.58□□□□□ -0.24
Msh2P43247 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh2P43247 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Msh2P43247 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Msh2P43247 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.57□□□□□ -0.24
Msh2P43247 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Msh2P43247 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Msh2P43247 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Mir874-201ENSMUST00000104769 76 ntBASIC13.57□□□□□ -0.24
Msh2P43247 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Msh2P43247 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Msh2P43247 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.57□□□□□ -0.24
Msh2P43247 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Msh2P43247 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.57□□□□□ -0.24
Msh2P43247 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.57□□□□□ -0.24
Msh2P43247 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.57□□□□□ -0.24
Msh2P43247 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Msh2P43247 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Msh2P43247 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms