Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Gm15376-201ENSMUST00000122258 783 ntBASIC12.78□□□□□ -0.36
TfamP40630 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TfamP40630 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TfamP40630 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TfamP40630 Gm28760-201ENSMUST00000185995 736 ntBASIC12.78□□□□□ -0.36
TfamP40630 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TfamP40630 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.78□□□□□ -0.36
TfamP40630 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.78□□□□□ -0.36
TfamP40630 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TfamP40630 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.78□□□□□ -0.36
TfamP40630 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.78□□□□□ -0.36
TfamP40630 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TfamP40630 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.78□□□□□ -0.36
TfamP40630 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TfamP40630 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TfamP40630 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TfamP40630 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TfamP40630 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.77□□□□□ -0.36
TfamP40630 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TfamP40630 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TfamP40630 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TfamP40630 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TfamP40630 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
TfamP40630 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TfamP40630 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TfamP40630 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TfamP40630 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.77□□□□□ -0.37
TfamP40630 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TfamP40630 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
TfamP40630 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.77□□□□□ -0.37
TfamP40630 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TfamP40630 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
TfamP40630 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TfamP40630 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TfamP40630 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
TfamP40630 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TfamP40630 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
TfamP40630 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.76□□□□□ -0.37
TfamP40630 Gm15321-201ENSMUST00000121290 288 ntBASIC12.76□□□□□ -0.37
TfamP40630 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.76□□□□□ -0.37
TfamP40630 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.76□□□□□ -0.37
TfamP40630 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.76□□□□□ -0.37
TfamP40630 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TfamP40630 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.76□□□□□ -0.37
TfamP40630 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TfamP40630 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
TfamP40630 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TfamP40630 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TfamP40630 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TfamP40630 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms