Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Timp3P39876 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.83□□□□□ -0.68
Timp3P39876 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Timp3P39876 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.83□□□□□ -0.68
Timp3P39876 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Timp3P39876 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.82□□□□□ -0.68
Timp3P39876 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.82□□□□□ -0.68
Timp3P39876 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Timp3P39876 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.82□□□□□ -0.68
Timp3P39876 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Gm12742-201ENSMUST00000117326 410 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.82□□□□□ -0.68
Timp3P39876 Snora78-201ENSMUST00000158630 128 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.82□□□□□ -0.68
Timp3P39876 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Gm24196-201ENSMUST00000179161 110 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.82□□□□□ -0.68
Timp3P39876 Gm45784-201ENSMUST00000188360 142 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Timp3P39876 Gm7561-201ENSMUST00000211203 886 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Timp3P39876 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Gm10012-201ENSMUST00000078252 192 ntBASIC10.82□□□□□ -0.68
Timp3P39876 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.82□□□□□ -0.68
Timp3P39876 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Timp3P39876 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.81□□□□□ -0.68
Timp3P39876 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Timp3P39876 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.81□□□□□ -0.68
Timp3P39876 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.81□□□□□ -0.68
Timp3P39876 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Gm13226-201ENSMUST00000117838 404 ntBASIC10.81□□□□□ -0.68
Timp3P39876 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Timp3P39876 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Timp3P39876 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.81□□□□□ -0.68
Timp3P39876 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Timp3P39876 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Timp3P39876 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.81□□□□□ -0.68
Timp3P39876 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.81□□□□□ -0.68
Timp3P39876 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Timp3P39876 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Timp3P39876 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms