Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdh4P39038 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdh4P39038 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Cdh4P39038 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdh4P39038 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cdh4P39038 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.62□□□□□ -0.39
Cdh4P39038 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Mir874-201ENSMUST00000104769 76 ntBASIC12.62□□□□□ -0.39
Cdh4P39038 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.62□□□□□ -0.39
Cdh4P39038 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdh4P39038 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdh4P39038 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdh4P39038 Gm8652-201ENSMUST00000181363 964 ntBASIC12.62□□□□□ -0.39
Cdh4P39038 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Gm18187-201ENSMUST00000196476 984 ntBASIC12.62□□□□□ -0.39
Cdh4P39038 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.62□□□□□ -0.39
Cdh4P39038 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.62□□□□□ -0.39
Cdh4P39038 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdh4P39038 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.62□□□□□ -0.39
Cdh4P39038 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdh4P39038 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh4P39038 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdh4P39038 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cdh4P39038 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.61□□□□□ -0.39
Cdh4P39038 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cdh4P39038 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Gm4984-201ENSMUST00000115987 360 ntBASIC12.61□□□□□ -0.39
Cdh4P39038 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh4P39038 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdh4P39038 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.61□□□□□ -0.39
Cdh4P39038 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdh4P39038 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.61□□□□□ -0.39
Cdh4P39038 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.61□□□□□ -0.39
Cdh4P39038 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.61□□□□□ -0.39
Cdh4P39038 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.61□□□□□ -0.39
Cdh4P39038 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cdh4P39038 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh4P39038 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh4P39038 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh4P39038 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh4P39038 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh4P39038 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms