Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.39□□□□□ -0.11
Sox5P35710 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sox5P35710 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox5P35710 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sox5P35710 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sox5P35710 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox5P35710 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Sox5P35710 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sox5P35710 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sox5P35710 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Gm11524-201ENSMUST00000119349 807 ntBASIC14.38□□□□□ -0.11
Sox5P35710 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.38□□□□□ -0.11
Sox5P35710 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.38□□□□□ -0.11
Sox5P35710 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.38□□□□□ -0.11
Sox5P35710 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox5P35710 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox5P35710 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sox5P35710 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.37□□□□□ -0.11
Sox5P35710 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.37□□□□□ -0.11
Sox5P35710 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.37□□□□□ -0.11
Sox5P35710 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sox5P35710 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.37□□□□□ -0.11
Sox5P35710 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Sox5P35710 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.37□□□□□ -0.11
Sox5P35710 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Sox5P35710 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox5P35710 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.37□□□□□ -0.11
Sox5P35710 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox5P35710 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox5P35710 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Sox5P35710 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox5P35710 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sox5P35710 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox5P35710 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox5P35710 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox5P35710 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox5P35710 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox5P35710 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sox5P35710 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox5P35710 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox5P35710 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.36□□□□□ -0.11
Sox5P35710 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms