Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp3P28862 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp3P28862 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp3P28862 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp3P28862 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Mmp3P28862 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.06□□□□□ -0.16
Mmp3P28862 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp3P28862 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Mmp3P28862 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.05□□□□□ -0.16
Mmp3P28862 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.05□□□□□ -0.16
Mmp3P28862 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.05□□□□□ -0.16
Mmp3P28862 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.05□□□□□ -0.16
Mmp3P28862 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
Mmp3P28862 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Mmp3P28862 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.05□□□□□ -0.16
Mmp3P28862 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Mmp3P28862 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Mmp3P28862 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp3P28862 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Mmp3P28862 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.04□□□□□ -0.16
Mmp3P28862 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.04□□□□□ -0.16
Mmp3P28862 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.04□□□□□ -0.16
Mmp3P28862 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.04□□□□□ -0.16
Mmp3P28862 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.04□□□□□ -0.16
Mmp3P28862 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Mmp3P28862 Gm37259-201ENSMUST00000193903 849 ntBASIC14.04□□□□□ -0.16
Mmp3P28862 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.04□□□□□ -0.16
Mmp3P28862 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Mmp3P28862 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.04□□□□□ -0.16
Mmp3P28862 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Mmp3P28862 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.04□□□□□ -0.16
Mmp3P28862 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Mmp3P28862 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.04□□□□□ -0.16
Mmp3P28862 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp3P28862 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp3P28862 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp3P28862 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp3P28862 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Mmp3P28862 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Gm12502-201ENSMUST00000120197 444 ntBASIC14.03□□□□□ -0.16
Mmp3P28862 Gm13316-201ENSMUST00000140537 691 ntBASIC14.03□□□□□ -0.16
Mmp3P28862 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.03□□□□□ -0.16
Mmp3P28862 Gm38241-201ENSMUST00000192641 898 ntBASIC14.03□□□□□ -0.16
Mmp3P28862 Gm19931-201ENSMUST00000198920 368 ntBASIC14.03□□□□□ -0.16
Mmp3P28862 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.03□□□□□ -0.16
Mmp3P28862 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.03□□□□□ -0.16
Mmp3P28862 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.03□□□□□ -0.16
Mmp3P28862 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms