Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.12□□□□□ -0.31
Nckap1P28660 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.12□□□□□ -0.31
Nckap1P28660 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.12□□□□□ -0.31
Nckap1P28660 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.12□□□□□ -0.31
Nckap1P28660 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.12□□□□□ -0.31
Nckap1P28660 Gm43822-201ENSMUST00000200285 476 ntBASIC13.12□□□□□ -0.31
Nckap1P28660 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.12□□□□□ -0.31
Nckap1P28660 Gm18935-201ENSMUST00000212692 664 ntBASIC13.12□□□□□ -0.31
Nckap1P28660 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.12□□□□□ -0.31
Nckap1P28660 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.12□□□□□ -0.31
Nckap1P28660 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.12□□□□□ -0.31
Nckap1P28660 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nckap1P28660 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.12□□□□□ -0.31
Nckap1P28660 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.12□□□□□ -0.31
Nckap1P28660 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nckap1P28660 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.12□□□□□ -0.31
Nckap1P28660 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nckap1P28660 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.12□□□□□ -0.31
Nckap1P28660 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nckap1P28660 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Nckap1P28660 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.11□□□□□ -0.31
Nckap1P28660 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Nckap1P28660 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Nckap1P28660 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Gm27501-201ENSMUST00000183599 107 ntBASIC13.11□□□□□ -0.31
Nckap1P28660 Gm43133-201ENSMUST00000197472 463 ntBASIC13.11□□□□□ -0.31
Nckap1P28660 Gm44364-201ENSMUST00000198368 141 ntBASIC13.11□□□□□ -0.31
Nckap1P28660 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.11□□□□□ -0.31
Nckap1P28660 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.11□□□□□ -0.31
Nckap1P28660 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nckap1P28660 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nckap1P28660 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nckap1P28660 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.1□□□□□ -0.31
Nckap1P28660 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.1□□□□□ -0.31
Nckap1P28660 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.1□□□□□ -0.31
Nckap1P28660 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Nckap1P28660 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Gm14723-201ENSMUST00000118686 215 ntBASIC13.1□□□□□ -0.31
Nckap1P28660 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.1□□□□□ -0.31
Nckap1P28660 Gm16479-201ENSMUST00000121706 932 ntBASIC13.1□□□□□ -0.31
Nckap1P28660 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Nckap1P28660 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.1□□□□□ -0.31
Nckap1P28660 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Nckap1P28660 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Gm6458-201ENSMUST00000211573 635 ntBASIC13.1□□□□□ -0.31
Nckap1P28660 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.1□□□□□ -0.31
Nckap1P28660 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.1□□□□□ -0.31
Nckap1P28660 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.1□□□□□ -0.31
Nckap1P28660 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nckap1P28660 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Nckap1P28660 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nckap1P28660 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Nckap1P28660 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms