Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Col2a1P28481 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.75□□□□□ -0.05
Col2a1P28481 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.75□□□□□ -0.05
Col2a1P28481 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col2a1P28481 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Col2a1P28481 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col2a1P28481 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.75□□□□□ -0.05
Col2a1P28481 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.75□□□□□ -0.05
Col2a1P28481 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col2a1P28481 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.74□□□□□ -0.05
Col2a1P28481 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Col2a1P28481 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col2a1P28481 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col2a1P28481 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Col2a1P28481 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Gm12997-201ENSMUST00000120207 640 ntBASIC14.74□□□□□ -0.05
Col2a1P28481 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.74□□□□□ -0.05
Col2a1P28481 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.74□□□□□ -0.05
Col2a1P28481 Gm13570-201ENSMUST00000140763 309 ntBASIC14.74□□□□□ -0.05
Col2a1P28481 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.74□□□□□ -0.05
Col2a1P28481 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.74□□□□□ -0.05
Col2a1P28481 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.74□□□□□ -0.05
Col2a1P28481 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Col2a1P28481 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col2a1P28481 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col2a1P28481 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.73□□□□□ -0.05
Col2a1P28481 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.73□□□□□ -0.05
Col2a1P28481 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col2a1P28481 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Gm14130-201ENSMUST00000118417 987 ntBASIC14.73□□□□□ -0.05
Col2a1P28481 Gm14999-201ENSMUST00000121039 624 ntBASIC14.73□□□□□ -0.05
Col2a1P28481 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Col2a1P28481 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.73□□□□□ -0.05
Col2a1P28481 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.73□□□□□ -0.05
Col2a1P28481 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col2a1P28481 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.73□□□□□ -0.05
Col2a1P28481 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col2a1P28481 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col2a1P28481 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col2a1P28481 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col2a1P28481 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col2a1P28481 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Col2a1P28481 Gm11597-201ENSMUST00000121423 964 ntBASIC14.72□□□□□ -0.05
Col2a1P28481 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col2a1P28481 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col2a1P28481 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.72□□□□□ -0.05
Col2a1P28481 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.72□□□□□ -0.05
Col2a1P28481 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.72□□□□□ -0.05
Col2a1P28481 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col2a1P28481 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col2a1P28481 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms