Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Gm38144-201ENSMUST00000192790 465 ntBASIC10.91□□□□□ -0.66
Cxcl1P12850 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.91□□□□□ -0.66
Cxcl1P12850 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.91□□□□□ -0.66
Cxcl1P12850 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cxcl1P12850 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cxcl1P12850 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.9□□□□□ -0.66
Cxcl1P12850 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.9□□□□□ -0.66
Cxcl1P12850 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Cxcl1P12850 Gm14822-201ENSMUST00000122247 291 ntBASIC10.9□□□□□ -0.66
Cxcl1P12850 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cxcl1P12850 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Gm27430-201ENSMUST00000184585 107 ntBASIC10.9□□□□□ -0.66
Cxcl1P12850 Gm27397-201ENSMUST00000184997 107 ntBASIC10.9□□□□□ -0.66
Cxcl1P12850 Gm44333-201ENSMUST00000197168 107 ntBASIC10.9□□□□□ -0.66
Cxcl1P12850 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cxcl1P12850 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.9□□□□□ -0.66
Cxcl1P12850 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.9□□□□□ -0.66
Cxcl1P12850 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cxcl1P12850 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcl1P12850 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcl1P12850 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcl1P12850 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cxcl1P12850 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.89□□□□□ -0.67
Cxcl1P12850 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.89□□□□□ -0.67
Cxcl1P12850 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcl1P12850 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.89□□□□□ -0.67
Cxcl1P12850 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms