Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC16.96■□□□□ 0.31
Hoxc9P09633 AC167013.1-201ENSMUST00000228592 202 ntBASIC16.96■□□□□ 0.31
Hoxc9P09633 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hoxc9P09633 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hoxc9P09633 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hoxc9P09633 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.96■□□□□ 0.3
Hoxc9P09633 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Hoxc9P09633 Gm14028-201ENSMUST00000117434 479 ntBASIC16.95■□□□□ 0.3
Hoxc9P09633 Gm14109-201ENSMUST00000118814 309 ntBASIC16.95■□□□□ 0.3
Hoxc9P09633 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.95■□□□□ 0.3
Hoxc9P09633 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Hoxc9P09633 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Hoxc9P09633 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Hoxc9P09633 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.95■□□□□ 0.3
Hoxc9P09633 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.95■□□□□ 0.3
Hoxc9P09633 Gm27046-201ENSMUST00000182160 463 ntBASIC16.95■□□□□ 0.3
Hoxc9P09633 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.95■□□□□ 0.3
Hoxc9P09633 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.95■□□□□ 0.3
Hoxc9P09633 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Hoxc9P09633 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc9P09633 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.94■□□□□ 0.3
Hoxc9P09633 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.94■□□□□ 0.3
Hoxc9P09633 Gm14130-201ENSMUST00000118417 987 ntBASIC16.94■□□□□ 0.3
Hoxc9P09633 Gm13665-201ENSMUST00000120830 528 ntBASIC16.94■□□□□ 0.3
Hoxc9P09633 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Hoxc9P09633 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.94■□□□□ 0.3
Hoxc9P09633 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.94■□□□□ 0.3
Hoxc9P09633 Gm44405-201ENSMUST00000198952 126 ntBASIC16.94■□□□□ 0.3
Hoxc9P09633 Gm18212-201ENSMUST00000211678 889 ntBASIC16.94■□□□□ 0.3
Hoxc9P09633 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Hoxc9P09633 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.94■□□□□ 0.3
Hoxc9P09633 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.94■□□□□ 0.3
Hoxc9P09633 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc9P09633 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms