Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa4P06798 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa4P06798 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa4P06798 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxa4P06798 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hoxa4P06798 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.96□□□□□ -0.33
Hoxa4P06798 Gm1335-201ENSMUST00000121653 386 ntBASIC12.96□□□□□ -0.33
Hoxa4P06798 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.96□□□□□ -0.33
Hoxa4P06798 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa4P06798 Snora78-201ENSMUST00000158630 128 ntBASIC12.96□□□□□ -0.33
Hoxa4P06798 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.96□□□□□ -0.33
Hoxa4P06798 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.96□□□□□ -0.33
Hoxa4P06798 Gm37042-201ENSMUST00000193816 581 ntBASIC12.96□□□□□ -0.33
Hoxa4P06798 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.96□□□□□ -0.33
Hoxa4P06798 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.96□□□□□ -0.33
Hoxa4P06798 Gm40466-201ENSMUST00000212174 422 ntBASIC12.96□□□□□ -0.33
Hoxa4P06798 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxa4P06798 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.96□□□□□ -0.33
Hoxa4P06798 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa4P06798 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa4P06798 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa4P06798 Gm10268-201ENSMUST00000085340 555 ntBASIC12.96□□□□□ -0.33
Hoxa4P06798 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxa4P06798 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa4P06798 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa4P06798 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa4P06798 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Hoxa4P06798 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa4P06798 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.96□□□□□ -0.34
Hoxa4P06798 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa4P06798 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa4P06798 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa4P06798 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa4P06798 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa4P06798 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa4P06798 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa4P06798 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Hoxa4P06798 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hoxa4P06798 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hoxa4P06798 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.95□□□□□ -0.34
Hoxa4P06798 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxa4P06798 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.95□□□□□ -0.34
Hoxa4P06798 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.95□□□□□ -0.34
Hoxa4P06798 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxa4P06798 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Snora73a-201ENSMUST00000082453 205 ntBASIC12.95□□□□□ -0.34
Hoxa4P06798 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hoxa4P06798 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Hoxa4P06798 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Hoxa4P06798 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa4P06798 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hoxa4P06798 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.94□□□□□ -0.34
Hoxa4P06798 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.94□□□□□ -0.34
Hoxa4P06798 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Hoxa4P06798 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxa4P06798 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Hoxa4P06798 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hoxa4P06798 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.94□□□□□ -0.34
Hoxa4P06798 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Gm11425-201ENSMUST00000119608 498 ntBASIC12.94□□□□□ -0.34
Hoxa4P06798 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxa4P06798 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hoxa4P06798 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxa4P06798 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hoxa4P06798 Gm9396-201ENSMUST00000076703 567 ntBASIC12.94□□□□□ -0.34
Hoxa4P06798 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Hoxa4P06798 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms