Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P01798 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.3□□□□□ -0.6
P01798 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01798 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01798 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01798 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01798 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01798 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
P01798 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01798 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01798 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
P01798 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.29□□□□□ -0.6
P01798 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
P01798 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
P01798 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Gm12341-201ENSMUST00000119724 503 ntBASIC11.29□□□□□ -0.6
P01798 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.29□□□□□ -0.6
P01798 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.29□□□□□ -0.6
P01798 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.29□□□□□ -0.6
P01798 Gm43438-201ENSMUST00000198133 379 ntBASIC11.29□□□□□ -0.6
P01798 Gm18307-201ENSMUST00000206864 949 ntBASIC11.29□□□□□ -0.6
P01798 Gm18062-201ENSMUST00000208020 547 ntBASIC11.29□□□□□ -0.6
P01798 Gm18055-201ENSMUST00000208254 547 ntBASIC11.29□□□□□ -0.6
P01798 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.29□□□□□ -0.6
P01798 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.29□□□□□ -0.6
P01798 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
P01798 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.29□□□□□ -0.6
P01798 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P01798 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
P01798 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P01798 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P01798 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P01798 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
P01798 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
P01798 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P01798 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.28□□□□□ -0.6
P01798 Gm12138-201ENSMUST00000122180 951 ntBASIC11.28□□□□□ -0.6
P01798 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
P01798 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.28□□□□□ -0.6
P01798 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P01798 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
P01798 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Gm17794-201ENSMUST00000220252 955 ntBASIC11.28□□□□□ -0.6
P01798 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
P01798 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P01798 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.28□□□□□ -0.6
P01798 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.28□□□□□ -0.6
P01798 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P01798 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
P01798 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P01798 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P01798 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
P01798 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P01798 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms