Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Syn1O88935 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.55□□□□□ -0.24
Syn1O88935 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Syn1O88935 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.55□□□□□ -0.24
Syn1O88935 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Syn1O88935 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.55□□□□□ -0.24
Syn1O88935 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.55□□□□□ -0.24
Syn1O88935 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syn1O88935 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syn1O88935 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syn1O88935 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Syn1O88935 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.55□□□□□ -0.24
Syn1O88935 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syn1O88935 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syn1O88935 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syn1O88935 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Syn1O88935 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syn1O88935 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syn1O88935 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Syn1O88935 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.54□□□□□ -0.24
Syn1O88935 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.54□□□□□ -0.24
Syn1O88935 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.54□□□□□ -0.24
Syn1O88935 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Gm25214-201ENSMUST00000104573 129 ntBASIC13.54□□□□□ -0.24
Syn1O88935 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Syn1O88935 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.54□□□□□ -0.24
Syn1O88935 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Syn1O88935 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.54□□□□□ -0.24
Syn1O88935 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.54□□□□□ -0.24
Syn1O88935 Gm23699-201ENSMUST00000158835 135 ntBASIC13.54□□□□□ -0.24
Syn1O88935 Gm8194-201ENSMUST00000159783 859 ntBASIC13.54□□□□□ -0.24
Syn1O88935 Gm2546-201ENSMUST00000182630 991 ntBASIC13.54□□□□□ -0.24
Syn1O88935 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.54□□□□□ -0.24
Syn1O88935 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Syn1O88935 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syn1O88935 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Gm15547-201ENSMUST00000122152 333 ntBASIC13.53□□□□□ -0.24
Syn1O88935 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.53□□□□□ -0.24
Syn1O88935 Gm19459-201ENSMUST00000176240 835 ntBASIC13.53□□□□□ -0.24
Syn1O88935 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.53□□□□□ -0.24
Syn1O88935 Gm45219-201ENSMUST00000205602 465 ntBASIC13.53□□□□□ -0.24
Syn1O88935 Gm5950-201ENSMUST00000213337 772 ntBASIC13.53□□□□□ -0.24
Syn1O88935 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Syn1O88935 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Syn1O88935 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syn1O88935 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Syn1O88935 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.52□□□□□ -0.24
Syn1O88935 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syn1O88935 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syn1O88935 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syn1O88935 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syn1O88935 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syn1O88935 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syn1O88935 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syn1O88935 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.52□□□□□ -0.25
Syn1O88935 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Syn1O88935 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Syn1O88935 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.52□□□□□ -0.25
Syn1O88935 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Syn1O88935 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Syn1O88935 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.52□□□□□ -0.25
Syn1O88935 Gm5070-201ENSMUST00000177599 862 ntBASIC13.52□□□□□ -0.25
Syn1O88935 Gm44405-201ENSMUST00000198952 126 ntBASIC13.52□□□□□ -0.25
Syn1O88935 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.52□□□□□ -0.25
Syn1O88935 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms