Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.64□□□□□ -0.39
Hcn1O88704 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Pck2-205ENSMUST00000226352 2784 ntBASIC12.64□□□□□ -0.39
Hcn1O88704 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Hcn1O88704 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hcn1O88704 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.64□□□□□ -0.39
Hcn1O88704 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.64□□□□□ -0.39
Hcn1O88704 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hcn1O88704 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.63□□□□□ -0.39
Hcn1O88704 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.63□□□□□ -0.39
Hcn1O88704 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.63□□□□□ -0.39
Hcn1O88704 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Hcn1O88704 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.63□□□□□ -0.39
Hcn1O88704 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.63□□□□□ -0.39
Hcn1O88704 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.63□□□□□ -0.39
Hcn1O88704 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.63□□□□□ -0.39
Hcn1O88704 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.63□□□□□ -0.39
Hcn1O88704 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hcn1O88704 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.63□□□□□ -0.39
Hcn1O88704 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hcn1O88704 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.63□□□□□ -0.39
Hcn1O88704 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Hcn1O88704 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.63□□□□□ -0.39
Hcn1O88704 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hcn1O88704 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hcn1O88704 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.63□□□□□ -0.39
Hcn1O88704 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hcn1O88704 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hcn1O88704 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Hcn1O88704 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hcn1O88704 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hcn1O88704 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hcn1O88704 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hcn1O88704 Gm15376-201ENSMUST00000122258 783 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Gm26464-201ENSMUST00000157094 305 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Mir7654-201ENSMUST00000185082 70 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms