Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Pde6dO55057 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.38□□□□□ -0.75
Pde6dO55057 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.38□□□□□ -0.75
Pde6dO55057 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
Pde6dO55057 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Pde6dO55057 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.38□□□□□ -0.75
Pde6dO55057 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
Pde6dO55057 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Pde6dO55057 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pde6dO55057 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.38□□□□□ -0.75
Pde6dO55057 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Pde6dO55057 Gm1401-201ENSMUST00000122048 772 ntBASIC10.38□□□□□ -0.75
Pde6dO55057 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC10.38□□□□□ -0.75
Pde6dO55057 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.38□□□□□ -0.75
Pde6dO55057 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.38□□□□□ -0.75
Pde6dO55057 Ighv8-7-201ENSMUST00000194349 297 ntBASIC10.38□□□□□ -0.75
Pde6dO55057 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.38□□□□□ -0.75
Pde6dO55057 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.38□□□□□ -0.75
Pde6dO55057 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.38□□□□□ -0.75
Pde6dO55057 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Pde6dO55057 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Pde6dO55057 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.38□□□□□ -0.75
Pde6dO55057 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.38□□□□□ -0.75
Pde6dO55057 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.38□□□□□ -0.75
Pde6dO55057 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.38□□□□□ -0.75
Pde6dO55057 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pde6dO55057 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.38□□□□□ -0.75
Pde6dO55057 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.37□□□□□ -0.75
Pde6dO55057 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pde6dO55057 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Gm15770-201ENSMUST00000117498 584 ntBASIC10.37□□□□□ -0.75
Pde6dO55057 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.37□□□□□ -0.75
Pde6dO55057 Gm7862-201ENSMUST00000121461 292 ntBASIC10.37□□□□□ -0.75
Pde6dO55057 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.37□□□□□ -0.75
Pde6dO55057 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.37□□□□□ -0.75
Pde6dO55057 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pde6dO55057 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.37□□□□□ -0.75
Pde6dO55057 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.37□□□□□ -0.75
Pde6dO55057 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.37□□□□□ -0.75
Pde6dO55057 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.37□□□□□ -0.75
Pde6dO55057 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.37□□□□□ -0.75
Pde6dO55057 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.37□□□□□ -0.75
Pde6dO55057 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.37□□□□□ -0.75
Pde6dO55057 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC10.37□□□□□ -0.75
Pde6dO55057 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms