Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.81□□□□□ -0.04
Stx1aO35526 Gm11594-201ENSMUST00000122313 162 ntBASIC14.81□□□□□ -0.04
Stx1aO35526 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.81□□□□□ -0.04
Stx1aO35526 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.81□□□□□ -0.04
Stx1aO35526 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.81□□□□□ -0.04
Stx1aO35526 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Stx1aO35526 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.81□□□□□ -0.04
Stx1aO35526 Gm17795-201ENSMUST00000214505 757 ntBASIC14.81□□□□□ -0.04
Stx1aO35526 Gm5161-201ENSMUST00000075243 853 ntBASIC14.81□□□□□ -0.04
Stx1aO35526 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Stx1aO35526 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.81□□□□□ -0.04
Stx1aO35526 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stx1aO35526 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Stx1aO35526 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.8□□□□□ -0.04
Stx1aO35526 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Stx1aO35526 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Stx1aO35526 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.8□□□□□ -0.04
Stx1aO35526 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.8□□□□□ -0.04
Stx1aO35526 Gm27618-201ENSMUST00000183671 60 ntBASIC14.8□□□□□ -0.04
Stx1aO35526 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Gm6888-201ENSMUST00000221983 706 ntBASIC14.8□□□□□ -0.04
Stx1aO35526 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Stx1aO35526 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stx1aO35526 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Stx1aO35526 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Stx1aO35526 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Stx1aO35526 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.79□□□□□ -0.04
Stx1aO35526 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.79□□□□□ -0.04
Stx1aO35526 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.79□□□□□ -0.04
Stx1aO35526 Gm4875-201ENSMUST00000118257 786 ntBASIC14.79□□□□□ -0.04
Stx1aO35526 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.79□□□□□ -0.04
Stx1aO35526 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.79□□□□□ -0.04
Stx1aO35526 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.79□□□□□ -0.04
Stx1aO35526 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.79□□□□□ -0.04
Stx1aO35526 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.79□□□□□ -0.04
Stx1aO35526 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Stx1aO35526 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Stx1aO35526 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stx1aO35526 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.78□□□□□ -0.04
Stx1aO35526 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.78□□□□□ -0.04
Stx1aO35526 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms