Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.43□□□□□ -0.74
Efnb3O35393 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.42□□□□□ -0.74
Efnb3O35393 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Efnb3O35393 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Efnb3O35393 Gm6912-201ENSMUST00000117218 544 ntBASIC10.42□□□□□ -0.74
Efnb3O35393 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.42□□□□□ -0.74
Efnb3O35393 Gm13616-201ENSMUST00000120600 222 ntBASIC10.42□□□□□ -0.74
Efnb3O35393 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.42□□□□□ -0.74
Efnb3O35393 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Efnb3O35393 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Gm25948-201ENSMUST00000175334 112 ntBASIC10.42□□□□□ -0.74
Efnb3O35393 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Gm44872-201ENSMUST00000207864 420 ntBASIC10.42□□□□□ -0.74
Efnb3O35393 Gm5779-201ENSMUST00000218467 910 ntBASIC10.42□□□□□ -0.74
Efnb3O35393 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.42□□□□□ -0.74
Efnb3O35393 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.42□□□□□ -0.74
Efnb3O35393 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Efnb3O35393 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.42□□□□□ -0.74
Efnb3O35393 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Efnb3O35393 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Efnb3O35393 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Efnb3O35393 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Efnb3O35393 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Efnb3O35393 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Efnb3O35393 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Efnb3O35393 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.41□□□□□ -0.74
Efnb3O35393 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Efnb3O35393 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Efnb3O35393 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Gm6415-201ENSMUST00000118488 348 ntBASIC10.41□□□□□ -0.74
Efnb3O35393 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Efnb3O35393 Gm22175-201ENSMUST00000175007 78 ntBASIC10.41□□□□□ -0.74
Efnb3O35393 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Efnb3O35393 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Efnb3O35393 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Efnb3O35393 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Efnb3O35393 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Efnb3O35393 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.41□□□□□ -0.74
Efnb3O35393 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms