Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.77□□□□□ -0.53
Alx4O35137 Gm2213-201ENSMUST00000197485 688 ntBASIC11.77□□□□□ -0.53
Alx4O35137 Chchd1-203ENSMUST00000224633 557 ntBASIC11.77□□□□□ -0.53
Alx4O35137 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.77□□□□□ -0.53
Alx4O35137 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.77□□□□□ -0.53
Alx4O35137 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Alx4O35137 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Alx4O35137 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.77□□□□□ -0.53
Alx4O35137 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Alx4O35137 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.77□□□□□ -0.53
Alx4O35137 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Alx4O35137 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Alx4O35137 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.76□□□□□ -0.53
Alx4O35137 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Alx4O35137 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.76□□□□□ -0.53
Alx4O35137 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.76□□□□□ -0.53
Alx4O35137 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.76□□□□□ -0.53
Alx4O35137 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.76□□□□□ -0.53
Alx4O35137 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.76□□□□□ -0.53
Alx4O35137 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.76□□□□□ -0.53
Alx4O35137 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.76□□□□□ -0.53
Alx4O35137 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.76□□□□□ -0.53
Alx4O35137 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Alx4O35137 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.76□□□□□ -0.53
Alx4O35137 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Alx4O35137 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.75□□□□□ -0.53
Alx4O35137 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.75□□□□□ -0.53
Alx4O35137 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Alx4O35137 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.75□□□□□ -0.53
Alx4O35137 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.75□□□□□ -0.53
Alx4O35137 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.75□□□□□ -0.53
Alx4O35137 Gm24513-201ENSMUST00000174964 138 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms