Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tcof1O08784 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.41■□□□□ 0.06
Tcof1O08784 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Tcof1O08784 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Tcof1O08784 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Tcof1O08784 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.41■□□□□ 0.06
Tcof1O08784 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tcof1O08784 Gm1335-201ENSMUST00000121653 386 ntBASIC15.41■□□□□ 0.06
Tcof1O08784 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.41■□□□□ 0.06
Tcof1O08784 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tcof1O08784 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.41■□□□□ 0.06
Tcof1O08784 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.41■□□□□ 0.06
Tcof1O08784 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.41■□□□□ 0.06
Tcof1O08784 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcof1O08784 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.4■□□□□ 0.06
Tcof1O08784 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.4■□□□□ 0.06
Tcof1O08784 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Tcof1O08784 Gm12384-201ENSMUST00000119228 919 ntBASIC15.4■□□□□ 0.06
Tcof1O08784 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tcof1O08784 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.4■□□□□ 0.06
Tcof1O08784 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.4■□□□□ 0.06
Tcof1O08784 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.4■□□□□ 0.06
Tcof1O08784 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcof1O08784 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.39■□□□□ 0.05
Tcof1O08784 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tcof1O08784 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Tcof1O08784 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Tcof1O08784 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tcof1O08784 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
Tcof1O08784 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Tcof1O08784 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.39■□□□□ 0.05
Tcof1O08784 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tcof1O08784 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.39■□□□□ 0.05
Tcof1O08784 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.39■□□□□ 0.05
Tcof1O08784 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.39■□□□□ 0.05
Tcof1O08784 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Gm27514-201ENSMUST00000183692 110 ntBASIC15.39■□□□□ 0.05
Tcof1O08784 Gm28693-202ENSMUST00000190758 331 ntBASIC15.39■□□□□ 0.05
Tcof1O08784 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.39■□□□□ 0.05
Tcof1O08784 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.39■□□□□ 0.05
Tcof1O08784 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.39■□□□□ 0.05
Tcof1O08784 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.39■□□□□ 0.05
Tcof1O08784 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.39■□□□□ 0.05
Tcof1O08784 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.39■□□□□ 0.05
Tcof1O08784 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.39■□□□□ 0.05
Tcof1O08784 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tcof1O08784 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.39■□□□□ 0.05
Tcof1O08784 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcof1O08784 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tcof1O08784 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tcof1O08784 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms