Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm12390-201ENSMUST00000117897 397 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm13829-201ENSMUST00000119600 138 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm22331-201ENSMUST00000158066 136 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm6266-201ENSMUST00000203844 806 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm7561-201ENSMUST00000211203 886 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm10012-201ENSMUST00000078252 192 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10553J3QPF1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.06□□□□□ -0.8
Gm10553J3QPF1 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Gm16372-201ENSMUST00000073088 450 ntBASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10553J3QPF1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms