Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Gm25732-201ENSMUST00000175168 60 ntBASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Gm38144-201ENSMUST00000192790 465 ntBASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Gm44100-201ENSMUST00000204329 436 ntBASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syngap1F6SEU4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.79□□□□□ -0.04
Syngap1F6SEU4 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.79□□□□□ -0.04
Syngap1F6SEU4 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Syngap1F6SEU4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Gm11597-201ENSMUST00000121423 964 ntBASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syngap1F6SEU4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms