Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Gm43438-201ENSMUST00000198133 379 ntBASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.47■□□□□ 0.07
Pcdhb9E9Q5G2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Gm8062-201ENSMUST00000139696 444 ntBASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Gm17208-201ENSMUST00000168388 535 ntBASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Gm5370-201ENSMUST00000187187 574 ntBASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb9E9Q5G2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb9E9Q5G2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb9E9Q5G2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb9E9Q5G2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb9E9Q5G2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Snord83b-201ENSMUST00000104546 94 ntBASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Gm13392-201ENSMUST00000117708 150 ntBASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Gm25927-201ENSMUST00000175058 117 ntBASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Gm43630-201ENSMUST00000201550 776 ntBASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb9E9Q5G2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms