Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Gm10729-202ENSMUST00000193403 1375 ntBASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hfm1D3Z4R1 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hfm1D3Z4R1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm14058-201ENSMUST00000116082 735 ntBASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm5732-201ENSMUST00000182596 1007 ntBASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 AC135469.1-201ENSMUST00000225984 772 ntBASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Mir680-2-201ENSMUST00000102163 110 ntBASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm23251-201ENSMUST00000103773 110 ntBASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm15432-201ENSMUST00000121106 195 ntBASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm9230-201ENSMUST00000188228 532 ntBASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm9540-201ENSMUST00000188230 478 ntBASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gm43058-201ENSMUST00000197645 625 ntBASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hfm1D3Z4R1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hfm1D3Z4R1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms