Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3543D3Z235 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.96□□□□□ -0.5
Gm3543D3Z235 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.96□□□□□ -0.5
Gm3543D3Z235 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3543D3Z235 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3543D3Z235 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3543D3Z235 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Gm13829-201ENSMUST00000119600 138 ntBASIC11.95□□□□□ -0.5
Gm3543D3Z235 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Gm38144-201ENSMUST00000192790 465 ntBASIC11.95□□□□□ -0.5
Gm3543D3Z235 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Gm8463-201ENSMUST00000208573 613 ntBASIC11.95□□□□□ -0.5
Gm3543D3Z235 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.95□□□□□ -0.5
Gm3543D3Z235 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3543D3Z235 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.94□□□□□ -0.5
Gm3543D3Z235 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.94□□□□□ -0.5
Gm3543D3Z235 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gm18062-201ENSMUST00000208020 547 ntBASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gm18055-201ENSMUST00000208254 547 ntBASIC11.94□□□□□ -0.5
Gm3543D3Z235 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3543D3Z235 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms