Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Gm27622-201ENSMUST00000183779 60 ntBASIC11.69□□□□□ -0.54
Gm11127A7VMS2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Gm37935-201ENSMUST00000192012 982 ntBASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.69□□□□□ -0.54
Gm11127A7VMS2 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm11127A7VMS2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gm23935-201ENSMUST00000102303 57 ntBASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gm24270-201ENSMUST00000102326 57 ntBASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gm24245-201ENSMUST00000157318 57 ntBASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gm25948-201ENSMUST00000175334 112 ntBASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.68□□□□□ -0.54
Gm11127A7VMS2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm11127A7VMS2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm11127A7VMS2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Gm11127A7VMS2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm11127A7VMS2 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.67□□□□□ -0.54
Gm11127A7VMS2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm11127A7VMS2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm11127A7VMS2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm11127A7VMS2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm11127A7VMS2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm11127A7VMS2 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.67□□□□□ -0.54
Gm11127A7VMS2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms