Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm22189-201ENSMUST00000103822 86 ntBASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm12485-201ENSMUST00000119641 291 ntBASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm25925-201ENSMUST00000158314 306 ntBASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm45242-201ENSMUST00000210666 2129 ntBASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC9.31□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm38094-201ENSMUST00000195864 2978 ntBASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm13730-201ENSMUST00000121036 1462 ntBASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm15376-201ENSMUST00000122258 783 ntBASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.3□□□□□ -0.92
Igkv4-53A0A0G2JFC6 Gm43094-201ENSMUST00000196549 921 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms