Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm28423-201ENSMUST00000190701 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21899-201ENSMUST00000190745 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21910-201ENSMUST00000191163 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21849-201ENSMUST00000191571 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm28678-201ENSMUST00000191593 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm20910-201ENSMUST00000193268 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21871-201ENSMUST00000194621 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 AC158529.1-201ENSMUST00000223618 239 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 BC001981-202ENSMUST00000191393 1545 ntBASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms