Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.82■■□□□ 1.08
Scn8aQ9WTU3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn8aQ9WTU3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn8aQ9WTU3 Gm10399-202ENSMUST00000202768 748 ntBASIC21.81■■□□□ 1.08
Scn8aQ9WTU3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.81■■□□□ 1.08
Scn8aQ9WTU3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn8aQ9WTU3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn8aQ9WTU3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn8aQ9WTU3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn8aQ9WTU3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Scn8aQ9WTU3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn8aQ9WTU3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn8aQ9WTU3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn8aQ9WTU3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.79■■□□□ 1.08
Scn8aQ9WTU3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scn8aQ9WTU3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn8aQ9WTU3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn8aQ9WTU3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn8aQ9WTU3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn8aQ9WTU3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.79■■□□□ 1.08
Scn8aQ9WTU3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn8aQ9WTU3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn8aQ9WTU3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn8aQ9WTU3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.78■■□□□ 1.08
Scn8aQ9WTU3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scn8aQ9WTU3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn8aQ9WTU3 Rps24-207ENSMUST00000224568 714 ntBASIC21.78■■□□□ 1.08
Scn8aQ9WTU3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn8aQ9WTU3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scn8aQ9WTU3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.78■■□□□ 1.08
Scn8aQ9WTU3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.78■■□□□ 1.08
Scn8aQ9WTU3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.78■■□□□ 1.08
Scn8aQ9WTU3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.78■■□□□ 1.08
Scn8aQ9WTU3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Scn8aQ9WTU3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn8aQ9WTU3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn8aQ9WTU3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn8aQ9WTU3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scn8aQ9WTU3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.77■■□□□ 1.08
Scn8aQ9WTU3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn8aQ9WTU3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn8aQ9WTU3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.77■■□□□ 1.08
Scn8aQ9WTU3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Scn8aQ9WTU3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn8aQ9WTU3 Gm45102-201ENSMUST00000207427 857 ntBASIC21.76■■□□□ 1.07
Scn8aQ9WTU3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.76■■□□□ 1.07
Scn8aQ9WTU3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn8aQ9WTU3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn8aQ9WTU3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.76■■□□□ 1.07
Scn8aQ9WTU3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn8aQ9WTU3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn8aQ9WTU3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Scn8aQ9WTU3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn8aQ9WTU3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.75■■□□□ 1.07
Scn8aQ9WTU3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Scn8aQ9WTU3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn8aQ9WTU3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Scn8aQ9WTU3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn8aQ9WTU3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn8aQ9WTU3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn8aQ9WTU3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn8aQ9WTU3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn8aQ9WTU3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Scn8aQ9WTU3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn8aQ9WTU3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scn8aQ9WTU3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scn8aQ9WTU3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.73■■□□□ 1.07
Scn8aQ9WTU3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Scn8aQ9WTU3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.73■■□□□ 1.07
Scn8aQ9WTU3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scn8aQ9WTU3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scn8aQ9WTU3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn8aQ9WTU3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn8aQ9WTU3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.7■■□□□ 1.07
Scn8aQ9WTU3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.7■■□□□ 1.07
Scn8aQ9WTU3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn8aQ9WTU3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.7■■□□□ 1.06
Scn8aQ9WTU3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.7■■□□□ 1.06
Scn8aQ9WTU3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn8aQ9WTU3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn8aQ9WTU3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn8aQ9WTU3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.7■■□□□ 1.06
Scn8aQ9WTU3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Scn8aQ9WTU3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.69■■□□□ 1.06
Scn8aQ9WTU3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.69■■□□□ 1.06
Scn8aQ9WTU3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scn8aQ9WTU3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.69■■□□□ 1.06
Scn8aQ9WTU3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn8aQ9WTU3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn8aQ9WTU3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn8aQ9WTU3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn8aQ9WTU3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Scn8aQ9WTU3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.68■■□□□ 1.06
Scn8aQ9WTU3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn8aQ9WTU3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
Scn8aQ9WTU3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn8aQ9WTU3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn8aQ9WTU3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn8aQ9WTU3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.67■■□□□ 1.06
Scn8aQ9WTU3 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms