Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.29■■□□□ 1
Vps35Q9EQH3 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.29■■□□□ 1
Vps35Q9EQH3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vps35Q9EQH3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Vps35Q9EQH3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.28■■□□□ 1
Vps35Q9EQH3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps35Q9EQH3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.28■■□□□ 1
Vps35Q9EQH3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps35Q9EQH3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Vps35Q9EQH3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Vps35Q9EQH3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Vps35Q9EQH3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps35Q9EQH3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vps35Q9EQH3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vps35Q9EQH3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps35Q9EQH3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps35Q9EQH3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vps35Q9EQH3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vps35Q9EQH3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps35Q9EQH3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Vps35Q9EQH3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps35Q9EQH3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps35Q9EQH3 Gm13238-201ENSMUST00000117655 780 ntBASIC21.25■□□□□ 0.99
Vps35Q9EQH3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vps35Q9EQH3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps35Q9EQH3 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.25■□□□□ 0.99
Vps35Q9EQH3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps35Q9EQH3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps35Q9EQH3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps35Q9EQH3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Vps35Q9EQH3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps35Q9EQH3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps35Q9EQH3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps35Q9EQH3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.23■□□□□ 0.99
Vps35Q9EQH3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps35Q9EQH3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps35Q9EQH3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps35Q9EQH3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps35Q9EQH3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps35Q9EQH3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Vps35Q9EQH3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps35Q9EQH3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vps35Q9EQH3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps35Q9EQH3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps35Q9EQH3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps35Q9EQH3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps35Q9EQH3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps35Q9EQH3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps35Q9EQH3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps35Q9EQH3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.21■□□□□ 0.99
Vps35Q9EQH3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.21■□□□□ 0.99
Vps35Q9EQH3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Vps35Q9EQH3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
Vps35Q9EQH3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps35Q9EQH3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps35Q9EQH3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps35Q9EQH3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vps35Q9EQH3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Vps35Q9EQH3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps35Q9EQH3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps35Q9EQH3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Vps35Q9EQH3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps35Q9EQH3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps35Q9EQH3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.19■□□□□ 0.98
Vps35Q9EQH3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps35Q9EQH3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps35Q9EQH3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps35Q9EQH3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vps35Q9EQH3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps35Q9EQH3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Vps35Q9EQH3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.18■□□□□ 0.98
Vps35Q9EQH3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps35Q9EQH3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps35Q9EQH3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps35Q9EQH3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.17■□□□□ 0.98
Vps35Q9EQH3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Vps35Q9EQH3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Vps35Q9EQH3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.17■□□□□ 0.98
Vps35Q9EQH3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps35Q9EQH3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps35Q9EQH3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps35Q9EQH3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps35Q9EQH3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps35Q9EQH3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Vps35Q9EQH3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.16■□□□□ 0.98
Vps35Q9EQH3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.16■□□□□ 0.98
Vps35Q9EQH3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Vps35Q9EQH3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps35Q9EQH3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps35Q9EQH3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms