Protein–RNA interactions for Protein: Q9D6G3

2900055J20Rik, RIKEN cDNA 2900055J20 gene, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2900055J20RikQ9D6G3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Golph3-202ENSMUST00000226517 2359 ntBASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Nkain2-201ENSMUST00000092602 558 ntBASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
2900055J20RikQ9D6G3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
2900055J20RikQ9D6G3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
2900055J20RikQ9D6G3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
2900055J20RikQ9D6G3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
2900055J20RikQ9D6G3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
2900055J20RikQ9D6G3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
2900055J20RikQ9D6G3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
2900055J20RikQ9D6G3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
2900055J20RikQ9D6G3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
2900055J20RikQ9D6G3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
2900055J20RikQ9D6G3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
2900055J20RikQ9D6G3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
2900055J20RikQ9D6G3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
2900055J20RikQ9D6G3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
2900055J20RikQ9D6G3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.42■□□□□ 0.38
2900055J20RikQ9D6G3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
2900055J20RikQ9D6G3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 Gm8503-201ENSMUST00000118131 455 ntBASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
2900055J20RikQ9D6G3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
2900055J20RikQ9D6G3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
2900055J20RikQ9D6G3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
2900055J20RikQ9D6G3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
2900055J20RikQ9D6G3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
2900055J20RikQ9D6G3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
2900055J20RikQ9D6G3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
2900055J20RikQ9D6G3 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.39■□□□□ 0.37
2900055J20RikQ9D6G3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
2900055J20RikQ9D6G3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
2900055J20RikQ9D6G3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
2900055J20RikQ9D6G3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
2900055J20RikQ9D6G3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.38■□□□□ 0.37
2900055J20RikQ9D6G3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
2900055J20RikQ9D6G3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
2900055J20RikQ9D6G3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
2900055J20RikQ9D6G3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
2900055J20RikQ9D6G3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
2900055J20RikQ9D6G3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
2900055J20RikQ9D6G3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
2900055J20RikQ9D6G3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
2900055J20RikQ9D6G3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
2900055J20RikQ9D6G3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
2900055J20RikQ9D6G3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
2900055J20RikQ9D6G3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
2900055J20RikQ9D6G3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
2900055J20RikQ9D6G3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
2900055J20RikQ9D6G3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
2900055J20RikQ9D6G3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.34■□□□□ 0.37
2900055J20RikQ9D6G3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
2900055J20RikQ9D6G3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms