Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Lysmd1Q9D0E3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lysmd1Q9D0E3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lysmd1Q9D0E3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lysmd1Q9D0E3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Lysmd1Q9D0E3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Lysmd1Q9D0E3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.73■■□□□ 1.39
Lysmd1Q9D0E3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Lysmd1Q9D0E3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lysmd1Q9D0E3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.72■■□□□ 1.39
Lysmd1Q9D0E3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.72■■□□□ 1.39
Lysmd1Q9D0E3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lysmd1Q9D0E3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Lysmd1Q9D0E3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.71■■□□□ 1.39
Lysmd1Q9D0E3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Lysmd1Q9D0E3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
Lysmd1Q9D0E3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Lysmd1Q9D0E3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Lysmd1Q9D0E3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.7■■□□□ 1.38
Lysmd1Q9D0E3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.7■■□□□ 1.38
Lysmd1Q9D0E3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.7■■□□□ 1.38
Lysmd1Q9D0E3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lysmd1Q9D0E3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Lysmd1Q9D0E3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lysmd1Q9D0E3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lysmd1Q9D0E3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC23.69■■□□□ 1.38
Lysmd1Q9D0E3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.69■■□□□ 1.38
Lysmd1Q9D0E3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Lysmd1Q9D0E3 Gm10602-201ENSMUST00000098239 609 ntBASIC23.69■■□□□ 1.38
Lysmd1Q9D0E3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Lysmd1Q9D0E3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lysmd1Q9D0E3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Lysmd1Q9D0E3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.68■■□□□ 1.38
Lysmd1Q9D0E3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.68■■□□□ 1.38
Lysmd1Q9D0E3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Lysmd1Q9D0E3 Nespas-201ENSMUST00000143738 1083 ntBASIC23.67■■□□□ 1.38
Lysmd1Q9D0E3 Mir7071-201ENSMUST00000184847 69 ntBASIC23.67■■□□□ 1.38
Lysmd1Q9D0E3 Gm43173-201ENSMUST00000202246 593 ntBASIC23.67■■□□□ 1.38
Lysmd1Q9D0E3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.67■■□□□ 1.38
Lysmd1Q9D0E3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Lysmd1Q9D0E3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Lysmd1Q9D0E3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Lysmd1Q9D0E3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Lysmd1Q9D0E3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lysmd1Q9D0E3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Lysmd1Q9D0E3 Gm26833-201ENSMUST00000180899 440 ntBASIC23.65■■□□□ 1.38
Lysmd1Q9D0E3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.65■■□□□ 1.38
Lysmd1Q9D0E3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lysmd1Q9D0E3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lysmd1Q9D0E3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Lysmd1Q9D0E3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.64■■□□□ 1.37
Lysmd1Q9D0E3 Gm10252-201ENSMUST00000209541 832 ntBASIC23.64■■□□□ 1.37
Lysmd1Q9D0E3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Lysmd1Q9D0E3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Lysmd1Q9D0E3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Lysmd1Q9D0E3 Gm27801-201ENSMUST00000184174 223 ntBASIC23.63■■□□□ 1.37
Lysmd1Q9D0E3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC23.63■■□□□ 1.37
Lysmd1Q9D0E3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lysmd1Q9D0E3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lysmd1Q9D0E3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC23.62■■□□□ 1.37
Lysmd1Q9D0E3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Lysmd1Q9D0E3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lysmd1Q9D0E3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lysmd1Q9D0E3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.61■■□□□ 1.37
Lysmd1Q9D0E3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Lysmd1Q9D0E3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lysmd1Q9D0E3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Lysmd1Q9D0E3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Lysmd1Q9D0E3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Lysmd1Q9D0E3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Lysmd1Q9D0E3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Lysmd1Q9D0E3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Lysmd1Q9D0E3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Lysmd1Q9D0E3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lysmd1Q9D0E3 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.59■■□□□ 1.37
Lysmd1Q9D0E3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.59■■□□□ 1.37
Lysmd1Q9D0E3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
Lysmd1Q9D0E3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.59■■□□□ 1.37
Lysmd1Q9D0E3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.59■■□□□ 1.37
Lysmd1Q9D0E3 AC158538.1-201ENSMUST00000225870 294 ntBASIC23.59■■□□□ 1.37
Lysmd1Q9D0E3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Lysmd1Q9D0E3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lysmd1Q9D0E3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Lysmd1Q9D0E3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Lysmd1Q9D0E3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Lysmd1Q9D0E3 Gm43060-201ENSMUST00000200621 289 ntBASIC23.58■■□□□ 1.37
Lysmd1Q9D0E3 Gm18671-201ENSMUST00000214826 683 ntBASIC23.58■■□□□ 1.37
Lysmd1Q9D0E3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Lysmd1Q9D0E3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Lysmd1Q9D0E3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Lysmd1Q9D0E3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
Lysmd1Q9D0E3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Lysmd1Q9D0E3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Lysmd1Q9D0E3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Lysmd1Q9D0E3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.55■■□□□ 1.36
Lysmd1Q9D0E3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Lysmd1Q9D0E3 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.55■■□□□ 1.36
Lysmd1Q9D0E3 Gm7977-201ENSMUST00000193787 748 ntBASIC23.55■■□□□ 1.36
Lysmd1Q9D0E3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Lysmd1Q9D0E3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms