Protein–RNA interactions for Protein: Q9CQD4

Chmp1b2, Charged multivesicular body protein 1b-2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b2Q9CQD4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1b2Q9CQD4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b2Q9CQD4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.45■□□□□ 0.7
Chmp1b2Q9CQD4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.45■□□□□ 0.7
Chmp1b2Q9CQD4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Chmp1b2Q9CQD4 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.45■□□□□ 0.7
Chmp1b2Q9CQD4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b2Q9CQD4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b2Q9CQD4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp1b2Q9CQD4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b2Q9CQD4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b2Q9CQD4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b2Q9CQD4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b2Q9CQD4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b2Q9CQD4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Chmp1b2Q9CQD4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b2Q9CQD4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Chmp1b2Q9CQD4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b2Q9CQD4 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.43■□□□□ 0.7
Chmp1b2Q9CQD4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b2Q9CQD4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b2Q9CQD4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b2Q9CQD4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b2Q9CQD4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b2Q9CQD4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b2Q9CQD4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b2Q9CQD4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b2Q9CQD4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b2Q9CQD4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chmp1b2Q9CQD4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b2Q9CQD4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chmp1b2Q9CQD4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b2Q9CQD4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Chmp1b2Q9CQD4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b2Q9CQD4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b2Q9CQD4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b2Q9CQD4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.41■□□□□ 0.7
Chmp1b2Q9CQD4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Chmp1b2Q9CQD4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.4■□□□□ 0.7
Chmp1b2Q9CQD4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b2Q9CQD4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Chmp1b2Q9CQD4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b2Q9CQD4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b2Q9CQD4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b2Q9CQD4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 Notumos-201ENSMUST00000151998 2659 ntBASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b2Q9CQD4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.38■□□□□ 0.69
Chmp1b2Q9CQD4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.38■□□□□ 0.69
Chmp1b2Q9CQD4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.38■□□□□ 0.69
Chmp1b2Q9CQD4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp1b2Q9CQD4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp1b2Q9CQD4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp1b2Q9CQD4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chmp1b2Q9CQD4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Chmp1b2Q9CQD4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp1b2Q9CQD4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1b2Q9CQD4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1b2Q9CQD4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Chmp1b2Q9CQD4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1b2Q9CQD4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1b2Q9CQD4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chmp1b2Q9CQD4 Gm45444-201ENSMUST00000211394 898 ntBASIC19.37■□□□□ 0.69
Chmp1b2Q9CQD4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Chmp1b2Q9CQD4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1b2Q9CQD4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1b2Q9CQD4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1b2Q9CQD4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1b2Q9CQD4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Chmp1b2Q9CQD4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1b2Q9CQD4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms