Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1Q9CQ70 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
H2afb1Q9CQ70 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1Q9CQ70 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1Q9CQ70 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1Q9CQ70 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1Q9CQ70 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1Q9CQ70 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.42■□□□□ 0.38
H2afb1Q9CQ70 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
H2afb1Q9CQ70 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1Q9CQ70 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
H2afb1Q9CQ70 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 Gm14523-201ENSMUST00000117260 558 ntBASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1Q9CQ70 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
H2afb1Q9CQ70 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
H2afb1Q9CQ70 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb1Q9CQ70 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb1Q9CQ70 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
H2afb1Q9CQ70 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1Q9CQ70 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1Q9CQ70 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1Q9CQ70 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1Q9CQ70 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.38■□□□□ 0.37
H2afb1Q9CQ70 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Gm11175-201ENSMUST00000116172 543 ntBASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Gm27502-201ENSMUST00000183495 199 ntBASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1Q9CQ70 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1Q9CQ70 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1Q9CQ70 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1Q9CQ70 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1Q9CQ70 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1Q9CQ70 Gm7332-201ENSMUST00000118351 454 ntBASIC17.35■□□□□ 0.37
H2afb1Q9CQ70 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1Q9CQ70 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
H2afb1Q9CQ70 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1Q9CQ70 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1Q9CQ70 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.35■□□□□ 0.37
H2afb1Q9CQ70 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1Q9CQ70 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
H2afb1Q9CQ70 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.34■□□□□ 0.37
H2afb1Q9CQ70 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.34■□□□□ 0.37
H2afb1Q9CQ70 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.34■□□□□ 0.37
H2afb1Q9CQ70 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1Q9CQ70 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1Q9CQ70 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.34■□□□□ 0.37
H2afb1Q9CQ70 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1Q9CQ70 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
H2afb1Q9CQ70 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb1Q9CQ70 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb1Q9CQ70 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb1Q9CQ70 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb1Q9CQ70 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
H2afb1Q9CQ70 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb1Q9CQ70 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb1Q9CQ70 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1Q9CQ70 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1Q9CQ70 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
H2afb1Q9CQ70 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1Q9CQ70 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1Q9CQ70 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1Q9CQ70 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1Q9CQ70 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1Q9CQ70 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.31■□□□□ 0.36
H2afb1Q9CQ70 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1Q9CQ70 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1Q9CQ70 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1Q9CQ70 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1Q9CQ70 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms