Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim8Q99PJ2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.77■□□□□ 0.91
Trim8Q99PJ2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim8Q99PJ2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim8Q99PJ2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim8Q99PJ2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim8Q99PJ2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim8Q99PJ2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim8Q99PJ2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Trim8Q99PJ2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim8Q99PJ2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim8Q99PJ2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trim8Q99PJ2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.75■□□□□ 0.91
Trim8Q99PJ2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.75■□□□□ 0.91
Trim8Q99PJ2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim8Q99PJ2 Gm6311-201ENSMUST00000073790 878 ntBASIC20.75■□□□□ 0.91
Trim8Q99PJ2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim8Q99PJ2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim8Q99PJ2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim8Q99PJ2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim8Q99PJ2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim8Q99PJ2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim8Q99PJ2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim8Q99PJ2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim8Q99PJ2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim8Q99PJ2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim8Q99PJ2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.73■□□□□ 0.91
Trim8Q99PJ2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim8Q99PJ2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.73■□□□□ 0.91
Trim8Q99PJ2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim8Q99PJ2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim8Q99PJ2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim8Q99PJ2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim8Q99PJ2 Gm44428-201ENSMUST00000204474 874 ntBASIC20.72■□□□□ 0.91
Trim8Q99PJ2 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.72■□□□□ 0.91
Trim8Q99PJ2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim8Q99PJ2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim8Q99PJ2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim8Q99PJ2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim8Q99PJ2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim8Q99PJ2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim8Q99PJ2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim8Q99PJ2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim8Q99PJ2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim8Q99PJ2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim8Q99PJ2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim8Q99PJ2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trim8Q99PJ2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim8Q99PJ2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim8Q99PJ2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim8Q99PJ2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim8Q99PJ2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim8Q99PJ2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim8Q99PJ2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim8Q99PJ2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim8Q99PJ2 Scarna2-201ENSMUST00000157560 414 ntBASIC20.66■□□□□ 0.9
Trim8Q99PJ2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim8Q99PJ2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim8Q99PJ2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim8Q99PJ2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim8Q99PJ2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim8Q99PJ2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim8Q99PJ2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim8Q99PJ2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim8Q99PJ2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim8Q99PJ2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim8Q99PJ2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.64■□□□□ 0.9
Trim8Q99PJ2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim8Q99PJ2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms