Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm9Q96EQ9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm9Q96EQ9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm9Q96EQ9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.06■□□□□ 0.96
Prdm9Q96EQ9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm9Q96EQ9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm9Q96EQ9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm9Q96EQ9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm9Q96EQ9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm9Q96EQ9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Prdm9Q96EQ9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Prdm9Q96EQ9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prdm9Q96EQ9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prdm9Q96EQ9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prdm9Q96EQ9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prdm9Q96EQ9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prdm9Q96EQ9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Prdm9Q96EQ9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prdm9Q96EQ9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm9Q96EQ9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm9Q96EQ9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm9Q96EQ9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.03■□□□□ 0.96
Prdm9Q96EQ9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm9Q96EQ9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm9Q96EQ9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm9Q96EQ9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prdm9Q96EQ9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prdm9Q96EQ9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.02■□□□□ 0.96
Prdm9Q96EQ9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.02■□□□□ 0.96
Prdm9Q96EQ9 Gm10399-202ENSMUST00000202768 748 ntBASIC21.02■□□□□ 0.96
Prdm9Q96EQ9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prdm9Q96EQ9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prdm9Q96EQ9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.02■□□□□ 0.95
Prdm9Q96EQ9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Prdm9Q96EQ9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Prdm9Q96EQ9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prdm9Q96EQ9 Gm7417-201ENSMUST00000192950 473 ntBASIC21.01■□□□□ 0.95
Prdm9Q96EQ9 Gm40881-201ENSMUST00000223397 166 ntBASIC21.01■□□□□ 0.95
Prdm9Q96EQ9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Prdm9Q96EQ9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prdm9Q96EQ9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prdm9Q96EQ9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prdm9Q96EQ9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Prdm9Q96EQ9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21■□□□□ 0.95
Prdm9Q96EQ9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prdm9Q96EQ9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prdm9Q96EQ9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prdm9Q96EQ9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prdm9Q96EQ9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prdm9Q96EQ9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.99■□□□□ 0.95
Prdm9Q96EQ9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prdm9Q96EQ9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prdm9Q96EQ9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Prdm9Q96EQ9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.98■□□□□ 0.95
Prdm9Q96EQ9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm9Q96EQ9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm9Q96EQ9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm9Q96EQ9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.97■□□□□ 0.95
Prdm9Q96EQ9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.97■□□□□ 0.95
Prdm9Q96EQ9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm9Q96EQ9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm9Q96EQ9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Prdm9Q96EQ9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm9Q96EQ9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm9Q96EQ9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm9Q96EQ9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.96■□□□□ 0.95
Prdm9Q96EQ9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.96■□□□□ 0.95
Prdm9Q96EQ9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.96■□□□□ 0.95
Prdm9Q96EQ9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Prdm9Q96EQ9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Prdm9Q96EQ9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm9Q96EQ9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm9Q96EQ9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm9Q96EQ9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Prdm9Q96EQ9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm9Q96EQ9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.94■□□□□ 0.94
Prdm9Q96EQ9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.94■□□□□ 0.94
Prdm9Q96EQ9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.94■□□□□ 0.94
Prdm9Q96EQ9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm9Q96EQ9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm9Q96EQ9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm9Q96EQ9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm9Q96EQ9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm9Q96EQ9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Prdm9Q96EQ9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm9Q96EQ9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm9Q96EQ9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.93■□□□□ 0.94
Prdm9Q96EQ9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm9Q96EQ9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm9Q96EQ9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm9Q96EQ9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm9Q96EQ9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm9Q96EQ9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms