Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha8Q91Y12 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha8Q91Y12 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.69■□□□□ 0.9
Pcdha8Q91Y12 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha8Q91Y12 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdha8Q91Y12 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha8Q91Y12 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha8Q91Y12 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdha8Q91Y12 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.67■□□□□ 0.9
Pcdha8Q91Y12 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdha8Q91Y12 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.67■□□□□ 0.9
Pcdha8Q91Y12 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.67■□□□□ 0.9
Pcdha8Q91Y12 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha8Q91Y12 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha8Q91Y12 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha8Q91Y12 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha8Q91Y12 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha8Q91Y12 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha8Q91Y12 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcdha8Q91Y12 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdha8Q91Y12 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdha8Q91Y12 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha8Q91Y12 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha8Q91Y12 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha8Q91Y12 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha8Q91Y12 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha8Q91Y12 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdha8Q91Y12 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha8Q91Y12 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha8Q91Y12 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.65■□□□□ 0.9
Pcdha8Q91Y12 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha8Q91Y12 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Pcdha8Q91Y12 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha8Q91Y12 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdha8Q91Y12 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdha8Q91Y12 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha8Q91Y12 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha8Q91Y12 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha8Q91Y12 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha8Q91Y12 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdha8Q91Y12 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha8Q91Y12 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha8Q91Y12 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdha8Q91Y12 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdha8Q91Y12 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha8Q91Y12 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha8Q91Y12 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha8Q91Y12 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdha8Q91Y12 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha8Q91Y12 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha8Q91Y12 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha8Q91Y12 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.61■□□□□ 0.89
Pcdha8Q91Y12 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha8Q91Y12 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha8Q91Y12 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdha8Q91Y12 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha8Q91Y12 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha8Q91Y12 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha8Q91Y12 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha8Q91Y12 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdha8Q91Y12 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.59■□□□□ 0.89
Pcdha8Q91Y12 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha8Q91Y12 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha8Q91Y12 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha8Q91Y12 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdha8Q91Y12 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdha8Q91Y12 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdha8Q91Y12 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdha8Q91Y12 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha8Q91Y12 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha8Q91Y12 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha8Q91Y12 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.58■□□□□ 0.89
Pcdha8Q91Y12 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha8Q91Y12 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha8Q91Y12 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha8Q91Y12 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha8Q91Y12 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pcdha8Q91Y12 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdha8Q91Y12 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha8Q91Y12 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.57■□□□□ 0.88
Pcdha8Q91Y12 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha8Q91Y12 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdha8Q91Y12 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.57■□□□□ 0.88
Pcdha8Q91Y12 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Pcdha8Q91Y12 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdha8Q91Y12 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdha8Q91Y12 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha8Q91Y12 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha8Q91Y12 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha8Q91Y12 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms