Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb4Q91XZ6 Iqck-206ENSMUST00000208658 2891 ntBASIC21.07■□□□□ 0.96
Pcdhb4Q91XZ6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb4Q91XZ6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb4Q91XZ6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb4Q91XZ6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb4Q91XZ6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb4Q91XZ6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb4Q91XZ6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb4Q91XZ6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb4Q91XZ6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb4Q91XZ6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.05■□□□□ 0.96
Pcdhb4Q91XZ6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb4Q91XZ6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb4Q91XZ6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb4Q91XZ6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb4Q91XZ6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb4Q91XZ6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb4Q91XZ6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb4Q91XZ6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb4Q91XZ6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb4Q91XZ6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb4Q91XZ6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb4Q91XZ6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhb4Q91XZ6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb4Q91XZ6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb4Q91XZ6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb4Q91XZ6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdhb4Q91XZ6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb4Q91XZ6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb4Q91XZ6 Gm14523-201ENSMUST00000117260 558 ntBASIC21.02■□□□□ 0.96
Pcdhb4Q91XZ6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb4Q91XZ6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Pcdhb4Q91XZ6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb4Q91XZ6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.02■□□□□ 0.96
Pcdhb4Q91XZ6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb4Q91XZ6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb4Q91XZ6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhb4Q91XZ6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb4Q91XZ6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdhb4Q91XZ6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb4Q91XZ6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb4Q91XZ6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb4Q91XZ6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb4Q91XZ6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb4Q91XZ6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Pcdhb4Q91XZ6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdhb4Q91XZ6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb4Q91XZ6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb4Q91XZ6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb4Q91XZ6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb4Q91XZ6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhb4Q91XZ6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb4Q91XZ6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb4Q91XZ6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.99■□□□□ 0.95
Pcdhb4Q91XZ6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb4Q91XZ6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhb4Q91XZ6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhb4Q91XZ6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb4Q91XZ6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb4Q91XZ6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb4Q91XZ6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb4Q91XZ6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb4Q91XZ6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb4Q91XZ6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb4Q91XZ6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb4Q91XZ6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb4Q91XZ6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.98■□□□□ 0.95
Pcdhb4Q91XZ6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb4Q91XZ6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb4Q91XZ6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb4Q91XZ6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb4Q91XZ6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb4Q91XZ6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.97■□□□□ 0.95
Pcdhb4Q91XZ6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb4Q91XZ6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Pcdhb4Q91XZ6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb4Q91XZ6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb4Q91XZ6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.96■□□□□ 0.95
Pcdhb4Q91XZ6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb4Q91XZ6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb4Q91XZ6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb4Q91XZ6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Pcdhb4Q91XZ6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb4Q91XZ6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb4Q91XZ6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb4Q91XZ6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb4Q91XZ6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms